1........10........20........30........40........50........60........70........80........90.......100.......110.......120.......130.......140.......150.......160.......170.......180.......190.......200......
Campylobacter ?AU?G?????????????????????UC??CGUGAUUAU?ACAG?AUG?UGGAAACGCCUUGCUCCAU?CCCGA?ACCAAGAAGCUAAGCACAUCGUGG?GU?GA??U?GAUACUACG????????CCUUACUGGC???????????????????AGGGGGA????A?AGUAGC?UC?AUUGCG?G???ACUU?--??---------
Agrobacterium ?CG?A?????????????????????CC??UGGUGGUCA?UCGC?GGG?GCGGCUGCACCCGUUCCCU?UUCCG?AACACGGCCGUGAAACGCCCCAGC?GC?CA??A?UGGUACUUC????????GUCUCAAGAC???????????????????GCGGGAG????A?GUAGGU?CG?CUGCCA?G???GUCU?--??---------
Escherichia ?UG?C?????????????????????CU??GGCGGCCGU?AGCG?CGG?UGGUCCCACCUGACCCCAU?GCCGA?ACUCAGAAGUGAAACGCCGUAGCG?CC?GA??U?GGUAGUGUG????????GGGUCUCCCC???????????????????AUGCGAG????A?GUAGGG?AA?CUGCCA?G???GCAU?--??---------
Thermotoga ?AU?C?????????????????????CC??CGGGUGCCG?AUAC?UGG?GGCGGGAAACACCCGGUUC?CAUUC?CGAACCCGGCCGUUAAGCCGCCCU?GG?GC??C?GAUGGUAGU????????AUGGGGGCAG???????????????????CCCCAUG????C?GAGAGU?AG?GUAGCG?C???CCGG?GG??AU-------
Thermus ?AA?U?????????????????????CC??CCCGUGCCC?AUAG?CGG?CGUGGAACCACCCGUUCCC?AUUCC?GAACACGGAAGUGAAACGCGCCAG?CG?CC??G?AUGGUACUG????????GGCGGGCGAC???????????????????CGCCUGG????G?AGAGUA?GG?UCGGUG?C???GGGG?GA??U--------
Bacillus ?UU?U?????????????????????GG??UGAUGAUGG?CAGA?GAG?GUCACACCCGUUCCCAUAC?CGAAC?ACGGAAGUUAAGCUCUCUAGCGCC?GA?UG??G?UAGUUGGGA????????CCUUGUCCCU???????????????????GUGAGAG????U?AGGACG?UC?GCCAAG?C???----?--??---------
Flavobacterium ?UA?A?????????????????????GG??UGGUUAUUG?CGGC?GGG?GCUCGACCUCUUCCCAUCC?CGAAC?AGAGUAGUUAAGCCCGCCUGCGCA?GA?UG??G?UACUGCAGU????????UAUGUGGGAG???????????????????AGUAUGU????C?GUCGCC?UU?UC----?-???----?--??---------
Methanothermobacter ?GU?U?????????????????????GG??CGGUCAUGG?CGUG?GGG?UUUAUACCUGAUCUCGUUU?CGAUC?UCAGUAGUUAAGUCCUGCUGCGUU?GU?GG??G?UGUGUACUG????????CGGUUUUUUG???????????????????CUGUGGG????A?AGCCCA?CU?UCACUG?C???CAGA?CA??A--------
Methanococcus ?UG?A?????????????????????CA??UAACGGUCA?AAGC?GGA?GGUGUAACAUCCGAUCCCA?UCCCG?AUCUCGGAAAUUAAGCCCUCCAGC?GA?UU??C?UUUAAGUAC????????UGCUAUCUAG???????????????????UGGGAAC????A?AAGUGA?CG?CCGUUA?G???UCAC?--??---------
Methanospirillum ?UC?A?????????????????????AU??AGCGGCCAC?AGCA?GGU?GUGUCACACCCGUUCCCAU?UCCGA?ACACGGAAGUUAAGACACCUCACG?UG?GA??U?GACGGUACU????????GAGGUACGCG???????????????????AGUCCUC????G?GGAAAU?CA?UCCUCG?C???UGCU?AU??UGUU-----
Nanoarchaeum ?GU?U?????????????????????UC??GUGGGAGGG?CCAU?AGC?GGCCCGGGAACCACCCGUA?CCCAU?CUCGAACACGGAAGUUAAGCCGGG?CC?GC??G?UCCCGAGUG????????GUACUGCCCC???????????????????GCGAAGG????G?GUGGGA?AG?CUCGGG?A???UGCC?C-??---------
Thermococcus ?GG?U?????????????????????AC??GGCGGUCAU?AGCG?GCG?GGGUCACACCCGGUCUCGU?UUCGA?CCCCGGAAGUUAAGCCCGCCAGCG?AU?CC??C?GGUUGUACU????????GCCCUCCGGG???????????????????AGGGGGC????G?GGAACC?GG?GGACGC?C???GCCG?GC??CAC------
Thermoplasma ?GG?C?????????????????????AA??CGGUCAUAG?CAGC?AGG?GAAACACCAGAUCCCAUUC?CGAAC?UCGACGGUUAAGCCUGCUGCGUAU?UG?CG??U?UGUACUGUA????????UGCCGCGAGG???????????????????GUACGGG????A?AGCGCA?AU?AUGCUG?U???UACC?AC??U--------
Pyrobaculum ?GC?C?????????????????????CC??UAACCCGGC?CAUA?GGC?GCCGGUGAUACGCCCGGUC?UCAUC?AGAACCCGGAAGCUAAGGCCGGCG?CC?GC??G?CUCGGGAGU????????ACUGGGCUCC???????????????????GCGAGGG????C?CCGGGA?AA?CCGGCG?U???GCUG?GG??AGGGGGCUU
Sulfolobus ?GC?C?????????????????????CA??CCCGGUCAC?AGUG?AGC?GGGCAACACCCGGACUCAU?UUCGA?ACCCGGAAGUUAAGCCGCUCACGU?UA?GU??G?GGGCCGUGG????????AUACCGUGAG???????????????????GAUCCGC????A?GCCCCA?CU?AAGCUG?G???GAUG?GG??UUUU-----
Halorubrum ?GU?A?????????????????????GG??CGGCCAAAG?CGGC?AGG?GAAAGACCCGUACCCAUUC?CGAAC?ACGGAAGUGAAGCCUGCCAGCGUA?CC?AG??C?UAGUACUGG????????AGUGGGAGAC???????????????????CCUCUGG????G?AGCGCU?GG?UUCGCC?G???CCUA?CU??C--------
Candida ?GG?U?????????????????????UG??CGGCCAUAU?CUAG?CAG?AAAGCACCGUUCCCCGUUC?GAUCA?ACCGUAGUUAAGCUGCUAAGAGCA?AU?AC??C?GAGUAGUGU????????AGUGGGAGAC???????????????????CAUACGC????G?AAACUA?UU?GUGCUG?C???AAUC?U-??---------
Cryptosporidium ?GC?A?????????????????????AU??CGGCCAUAC?UACA?UCG?AAUAUACCGGAUCCCAUCA?GAACU?CCGAAGUCAAGCGGUGUAAGGUUC?GG?UU??A?GUACUAGGG????????UGGGGGACCA???????????????????CCUGGGA????A?GACCAG?AA?UGUCGA?U???CGCC?UC??---------
Drosophila ?GC?C?????????????????????AA??CGACCAUAC?CACG?CUG?AAUACAUCGGUUCUCGUCC?GAUCA?CCGAAAUUAAGCAGCGUCGGGCGC?GG?UU??A?GUACUUAGA????????UGGGGGACCG???????????????????CUUGGGA????A?CACCGC?GU?GUUGUU?G???GCCU?--??---------
Euglena ?GA?G?????????????????????UA??CGGCCAUAC?UACC?GGG?AAUACACCUGAACCCGUUC?GAUUU?CAGAAGUUAAGCCGGGUUAGGCCC?AG?UU??A?GUACUGAGU????????GGGCGACCAC???????????????????UUGGGAA????C?ACUGGG?UG?CUGUAC?G???CUU-?--??---------
Homo ?GU?C?????????????????????UA??CGGCCAUAC?CACC?CUG?AACGCGCCCGAUCUCGUCU?GAUCU?CGGAAGCUAAGCAGGGUCGGGCCU?GG?UU??A?GUACUUGGA????????UGGGAGACCG???????????????????CCUGGGA????A?UACCGG?GU?GCUGUA?G???GCUU?U-??---------
Caenorhabditis ?GC?U?????????????????????UA??CGACCAUAU?CACG?UUG?AAUGCACGCCAUCCCGUCC?GAUCU?GGCAAGUUAAGCAACGUUGAGUCC?AG?UU??A?GUACUUGGA????????UCGGAGACGG???????????????????CCUGGGA????A?UCCUGG?AU?GUUGUA?A???GCU-?--??---------
Dictyostelium ?GU?A?????????????????????UA??CGGCCAUAC?UAGG?UUG?GAAACACAUCAUCCCGUUC?GAUCU?GAUAAGUAAAUCGACCUCAGGCCU?UC?CA??A?GUACUCUGG????????UUGGAGACAA???????????????????CAGGGGA????A?CAUAGG?GU?GCUGUA?U???ACU-?--??---------
Nosema ?GA?U?????????????????????AC??GGUUAUAUU?UACU?GAA?AACCACCGGAACCCAUCAG?AACUC?CGAAGUUAAACCAGUAUGAGCUUA?AU?UA??G?UACUAAGAA????????GGGAGACCAC???????????????????UUGGGAA????C?GUUGGG?UG?GUA---?-???----?--??---------
Zea ?GG?A?????????????????????UG??CGAUCAUAC?CAGC?ACU?AAAGCACCGGAUCCCAUCA?GAACU?CCGAAGUUAAGCGUGCUUGGGCGA?GA?GU??A?GUACUAGGA????????UGGGUGACCU???????????????????CCUGGGA????A?GUCCUC?GU?GUUGCA?U???UCC-?--??---------
???????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????
Campylobacter2 -AU-GUC-------------------CG--UGAUUAUAC-AGAU-GUG-GAAACGCCUUGCUCCAUCCCGAACC-AAGAAGCUAAGCACAUCGUGGG---UG-AU--G-AUACUACGC--------CU-------UACUGGC-------------AGGGGGAAAGUAG-------CUCAUUGC-GG---ACUU-----?????????
Agrobacterium2 -CGAC------CU-------------GG--UGGUCAUCG-CGGG-GCG-GCUGCACCCGUUCCCUUUCCGAACA-CGGCCGUGAAACGCCCCAGCGC---CA-AU--G-GUACUUCGU--------CU-------C---------------AAGACGCGGGAGAGUAG-------GUCGCUGCCAG---GUCU-----?????????
Escherichia2 -UG-C------CU-------------GG--CGGCCGUAG-CGCG-GUG-GUCCCACCUGACCCCAUGCCGAACU-CAGAAGUGAAACGCCGUAGCGC---CG-AU--G-GUAGUGUGG---GGUCUCC-------C-------------------CAUGCGAGAGUAG-------GGAACUGCCAG---GCAU-----?????????
Thermotoga2 -AU-C----CCCG-------------GG--UGCCGAUAC-UGGG-GCGGGAAACACCCGGUUCCAUUCCGAACC-CGGCCGUUAAGCCGCCCUGGGC---CG-AU--G-GUAGUAUGG-GG-GCAGCC-------C-------------------CAUGCGAGAGUAG-------GUAGCGCCCGG---GGAU-----?????????
Thermus2 -AA-U----CCCC-------------CG--UGCCCAUAG-CGGC-GUG-GAACCACCCGUUCCCAUUCCGAACA-CGGAAGUGAAACGCGCCAGCGC---CG-AU--G-GUACUGGGC-GG-GCGACC-------G-------------------CCUGGGAGAGUAG-------GUCGGUGCGGG---GGAU-----?????????
Bacillus2 -UU-U---------------------GG--UGAUGAUGG-CAGA-GAG-GUCACACCCGUUCCCAUACCGAACA-CGGAAGUUAAGCUCUCUAGCGC---CG-AU--G-GUAGUUGGGA-------CC-------U-----------UGUC----CCUGUGAGAGUAG-------GACGUCGCCAA---GC-------?????????
Flavobacterium2 -UA-A---------------------GG--UGGUUAUUG-CGGC-GGG-GCUCGACCUCUUCCCAUCCCGAACA-GAGUAGUUAAGCCCGCCUGCGC---AG-AU--G-GUACUGCAG--------UU-------A-------------------UGUGGGAGAGUAU-------GUCGUCGCCUU---UC-------?????????
Methanothermobacter2 -GU-U---------------------GG--CGGUCAUGG-CGUG-GGG-UUUAUACCUGAUCUCGUUUCGAUCU-CAGUAGUUAAGUCCUGCUGCGUUGUGG-GU--GUGUACUGCGG--------UU-------U------UUUGC--------UGUGGGA----A-GCCCAC-UUCACUGCCAG---ACAA-----?????????
Methanococcus2 UGA-C-----------AU--------AA--CGGUCAAAG-CGGA-GGU-GUAACAUCCGAUCCCAUCCCGAUCU-CGGAAAUUAAGCCCUCCAGCGAUUCUU-UA--A-GUACUGCUA--------UC-------U-------------------AGUGGGA----A-CAAAGU-GACGCCGUUAG---UCAC-----?????????
Methanospirillum2 -UC-A--AU-----------------AG--CGGCCACAG-CAGG-UGU-GUCACACCCGUUCCCAUUCCGAACA-CGGAAGUUAAGACACCUCACGUGGAUG-AC--G-GUACUGAGG--------UACGCGAGUC-------------------CUCGGGA----A-AUCAUC-CUCGCUGCUAU---UGUU-----?????????
Nanoarchaeum2 -GU-U-------------UCGUGG--GA--GGGCCAUAG-CGGCCCGG-GAACCACCCGUACCCAUCUCGAACA-CGGAAGUUAAGCCGGGCCGCGUCCCGA-GU--G-GUACUGC----------CCCGCGAAGG-------------------GGUGGGA----A-GCUCGG-GAUGC-----------CC-----?????????
Thermococcus2 -GG-U-------------------ACGG--CGGUCAUAG-CGGC-GGG-GUCACACCCGGUCUCGUUUCGACCC-CGGAAGUUAAGCCCGCCAGCGAUCCCG-GU--U-GUACUGCCC--------UCCGGGAGGG-------------------GGCGGGA----A-C-CGGG-GACGCCGCCGG---CCAC-----?????????
Thermoplasma2 -GG-C---------------------AA--CGGUCAUAG-CAGC-AGG-GAAACACCAGAUCCCAUUCCGAACU-CGACGGUUAAGCCUG-CUGCGUAUUGC-GU--U-GUACUGUAU--------GCCGCGAGGG-------------------UACGGGA----A-GCGCAA-UAUGCUGUUAC---CACU-----?????????
Pyrobaculum2 -GC-C--------CCU----------AACCCGGCCAUAGGCGCC-GGU-GAUACGCCCGGUCUCAUCA-GAACC-CGGAAGCUAAGGCCGGCGCCGCGCUCG-GG--A-GUACUGGGC--------UCCGCGAGGG-------------------CCCGGGA----A-ACCGG--CGUGCUGGGAGGGGGCUU-----?????????
Sulfolobus2 -GC-C---------------------CACCCGGUCACAG-UGAG-CGG-GCAACACCCGGACUCAUUUCGAACC-CGGAAGUUAAGCCGCUCA-CGUUAGUG-GGGCC-G---UGGAU--------ACCGUGAGGA-------------------UCCGC-A----G-CCCCAC-UAAGCUGGGAUGGGUUUU-----?????????
Halorubrum2 -GU-A---------------------GG--CGGCCAAAG-CGGC-AGG-GAAAGACCCGUACCCAUUCCGAACA-CGGAAGUGAAGCCUGCCAGCGUACCAG-CU--A-GUACUGGAG--------UGGGAGACCC-------------------UCUGGGA----G-CGCUGG-UUCGCCGCC-U---ACUC-----?????????
Candida2 -GG-U---------------------UG--CGGCCAUAU-CUAG-CAG-AAAGCACCGUUCCCCGUUC-GAUCAACCGUAGUUAAGCUGCUAAGAGCAA-UACCG--A-GUAGUGUAG--------UGGGAGACCA-------------------UACGCGA----A-ACUAUU-GU-GCUGCA-A---UCU------?????????
Cryptosporidium2 -GC-A---------------------AU--CGGCCAUAC-UACA-UCG-AAUAUACCGGAUCCCAUCA-GAACU-CCGAAGUCAAGCGGUGUAAGGUUC-GG-UU--A-GUACUAGGG--------UGGGGGACCA-------------------CCUGGGA----A-GACCAGAAU-GUCGAU-C---GCC--UC--?????????
Drosophila2 -GC-C---------------------AA--CGACCAUAC-CACG-CUG-AAUACAUCGGUUCUCGUCC-GAUCA-CCGAAAUUAAGCAGCGUCGGGCGC-GG-UU--A-GUACUUAGA--------UGGGGGACCG-------------------CUUGGGA----A-CACCGC-GU-GUUGUU-G---GCCU-----?????????
Euglena2 -GA-G---------------------UA--CGGCCAUAC-UACC-GGG-AAUACACCUGAACCCGUUC-GAUUU-CAGAAGUUAAGCCGGGUUAGGCCC-AG-UU--A-GUACUGAG---------UGGGCGACCA-------------------CUUGGGA----A-CACUGG-GU-GCUGUA-C---GCUU-----?????????
Homo2 -GU-C---------------------UA--CGGCCAUAC-CACC-CUG-AACGCGCCCGAUCUCGUCU-GAUCU-CGGAAGCUAAGCAGGGUCGGGCCU-GG-UU--A-GUACUUGGA--------UGGGAGACCG-------------------CCUGGGA----A-UACCGG-GU-GCUGUA-G---GCU----UU?????????
Caenorhabditis2 -GC-U---------------------UA--CGACCAUAU-CACG-UUG-AAUGCACGCCAUCCCGUCC-GAUCU-GGCAAGUUAAGCAACGUUGAGUCC-AG-UU--A-GUACUUGGA--------UCGGAGACGG-------------------CCUGGGA----A-UCCUGG-AU-GUUGUA-A---GCU------?????????
Dictyostelium2 -GU-A---------------------UA--CGGCCAUAC-UAGG-UUG-GAAACACAUCAUCCCGUUC-GAUCU-GAUAAGUAAAUCGACCUCAGGCCU-UC-CA--A-GUACUCUGG--------UUGGAGACAA-------------------CAGGGGA----A-CAUAGG-GU-GCUGUA-U---ACU------?????????
Nosema2 -G--A---------------------UA--CGGUUAUAU-UUAC-UGA-AAACCACCGGAACCCAUCA-GAACU-CCGAAGUUAAACCAGUAUGAGCUU-AA-UU--A-GUACUAAGA--------AGGGAGACCA-------------------CUUGGGA----A-CGUUGG-GU-GGU------------A----?????????
Zea2 -GG-A---------------------UG--CGAUCAUAC-CAGC-ACU-AAAGCACCGGAUCCCAUCA-GAACU-CCGAAGUUAAGCGUGCUUGGGCGA-GA-GU--A-GUACUAGGA--------UGGGUGACCU-------------------CCUGGGA----A-GUCCUC-GU-GUUGCA-U---UCC------?????????