# Loading trees from 'few-globins-free5-1/C1.trees'... # Loading trees from 'few-globins-free5-2/C1.trees'... # Loading trees from 'few-globins-free5-3/C1.trees'... # Loading trees from 'few-globins-free5-4/C1.trees'... # Loading trees from 'few-globins-free5-5/C1.trees'... # Loading trees from 'few-globins-free5-6/C1.trees'... # Loading trees from 'few-globins-free5-7/C1.trees'... # Loading trees from 'few-globins-free5-8/C1.trees'... # [ seed = 8677714464932492847 pseudocount = 1 blocksize = 4001 ] Support for the different predicates: 1/29: hemo-tunicate-1 hemo-tunicate-3 | HbA-blood_clam HbI-Lucina HbII-Lucina beetle cyto-beetle cyto-fish cyto-human drosophila hagfish hemo-alpha-human hemo-alpha-shark hemo-beta-human hemo-beta-shark hemo-polychaete-4 honeybee lamprey leghemo-pea leghemo-rice midge-8 myo-Dolabella myo-human myo-polychaete myo-shark myo-snail neuro-human neuro-zebrafish PP1-1 = 1.000 (1=200000 0=1) [1 !!!] PP1-2 = 1.000 (1=200001 0=0) [0 !!!] PP1-3 = 1.000 (1=200000 0=1) [1 !!!] PP1-4 = 1.000 (1=200000 0=1) [1 !!!] PP1-5 = 1.000 (1=200001 0=0) [0 !!!] PP1-6 = 1.000 (1=200001 0=0) [0 !!!] PP1-7 = 1.000 (1=199997 0=4) [3 !!] PP1-8 = 1.000 (1=200001 0=0) [0 !!!] PP1 = 1.000 (1=1600001 0=7) [6 !!] LOD1-1 = 5.000 LOD1-2 = 5.301 LOD1-3 = 5.000 LOD1-4 = 5.000 LOD1-5 = 5.301 LOD1-6 = 5.301 LOD1-7 = 4.602 LOD1-8 = 5.301 LOD1 = 5.028 RNe1 = inf 2/29: beetle cyto-beetle | HbA-blood_clam HbI-Lucina HbII-Lucina cyto-fish cyto-human drosophila hagfish hemo-alpha-human hemo-alpha-shark hemo-beta-human hemo-beta-shark hemo-polychaete-4 hemo-tunicate-1 hemo-tunicate-3 honeybee lamprey leghemo-pea leghemo-rice midge-8 myo-Dolabella myo-human myo-polychaete myo-shark myo-snail neuro-human neuro-zebrafish PP1-1 = 1.000 (1=199999 0=2) [1 !!!] PP1-2 = 1.000 (1=200001 0=0) [0 !!!] PP1-3 = 1.000 (1=200001 0=0) [0 !!!] PP1-4 = 1.000 (1=199998 0=3) [1 !!!] PP1-5 = 1.000 (1=199999 0=2) [1 !!!] PP1-6 = 1.000 (1=200001 0=0) [0 !!!] PP1-7 = 1.000 (1=199997 0=4) [1 !!!] PP1-8 = 1.000 (1=200001 0=0) [0 !!!] PP1 = 1.000 (1=1599997 0=11) [4 !!] LOD1-1 = 4.824 LOD1-2 = 5.301 LOD1-3 = 5.301 LOD1-4 = 4.699 LOD1-5 = 4.824 LOD1-6 = 5.301 LOD1-7 = 4.602 LOD1-8 = 5.301 LOD1 = 4.925 RNe1 = inf 3/29: cyto-fish cyto-human | HbA-blood_clam HbI-Lucina HbII-Lucina beetle cyto-beetle drosophila hagfish hemo-alpha-human hemo-alpha-shark hemo-beta-human hemo-beta-shark hemo-polychaete-4 hemo-tunicate-1 hemo-tunicate-3 honeybee lamprey leghemo-pea leghemo-rice midge-8 myo-Dolabella myo-human myo-polychaete myo-shark myo-snail neuro-human neuro-zebrafish PP1-1 = 1.000 (1=199998 0=3) [1 !!!] PP1-2 = 1.000 (1=199999 0=2) [1 !!!] PP1-3 = 1.000 (1=200000 0=1) [1 !!!] PP1-4 = 1.000 (1=199998 0=3) [1 !!!] PP1-5 = 1.000 (1=199998 0=3) [1 !!!] PP1-6 = 1.000 (1=199998 0=3) [1 !!!] PP1-7 = 1.000 (1=199996 0=5) [1 !!!] PP1-8 = 1.000 (1=199997 0=4) [1 !!!] PP1 = 1.000 (1=1599984 0=24) [8 !!] LOD1-1 = 4.699 LOD1-2 = 4.824 LOD1-3 = 5.000 LOD1-4 = 4.699 LOD1-5 = 4.699 LOD1-6 = 4.699 LOD1-7 = 4.523 LOD1-8 = 4.602 LOD1 = 4.699 ACT = 3.333 Ne = 480008.918 RNe1 = inf 4/29: myo-human myo-shark | HbA-blood_clam HbI-Lucina HbII-Lucina beetle cyto-beetle cyto-fish cyto-human drosophila hagfish hemo-alpha-human hemo-alpha-shark hemo-beta-human hemo-beta-shark hemo-polychaete-4 hemo-tunicate-1 hemo-tunicate-3 honeybee lamprey leghemo-pea leghemo-rice midge-8 myo-Dolabella myo-polychaete myo-snail neuro-human neuro-zebrafish PP1-1 = 1.000 (1=199995 0=6) [1 !!!] PP1-2 = 1.000 (1=199996 0=5) [1 !!!] PP1-3 = 1.000 (1=199999 0=2) [1 !!!] PP1-4 = 1.000 (1=199996 0=5) [1 !!!] PP1-5 = 1.000 (1=199996 0=5) [1 !!!] PP1-6 = 1.000 (1=200000 0=1) [1 !!!] PP1-7 = 1.000 (1=199999 0=2) [1 !!!] PP1-8 = 1.000 (1=199999 0=2) [1 !!!] PP1 = 1.000 (1=1599980 0=28) [8 !!] LOD1-1 = 4.456 LOD1-2 = 4.523 LOD1-3 = 4.824 LOD1-4 = 4.523 LOD1-5 = 4.523 LOD1-6 = 5.000 LOD1-7 = 4.824 LOD1-8 = 4.824 LOD1 = 4.648 ACT = 4.357 Ne = 367220.395 RNe1 = inf 5/29: hagfish lamprey | HbA-blood_clam HbI-Lucina HbII-Lucina beetle cyto-beetle cyto-fish cyto-human drosophila hemo-alpha-human hemo-alpha-shark hemo-beta-human hemo-beta-shark hemo-polychaete-4 hemo-tunicate-1 hemo-tunicate-3 honeybee leghemo-pea leghemo-rice midge-8 myo-Dolabella myo-human myo-polychaete myo-shark myo-snail neuro-human neuro-zebrafish PP1-1 = 1.000 (1=199997 0=4) [1 !!!] PP1-2 = 1.000 (1=199996 0=5) [1 !!!] PP1-3 = 1.000 (1=199999 0=2) [1 !!!] PP1-4 = 1.000 (1=199994 0=7) [1 !!!] PP1-5 = 1.000 (1=200001 0=0) [0 !!!] PP1-6 = 1.000 (1=199997 0=4) [1 !!!] PP1-7 = 1.000 (1=199998 0=3) [1 !!!] PP1-8 = 1.000 (1=199997 0=4) [1 !!!] PP1 = 1.000 (1=1599979 0=29) [7 !!] LOD1-1 = 4.602 LOD1-2 = 4.523 LOD1-3 = 4.824 LOD1-4 = 4.398 LOD1-5 = 5.301 LOD1-6 = 4.602 LOD1-7 = 4.699 LOD1-8 = 4.602 LOD1 = 4.636 ACT = 4.586 Ne = 348881.093 RNe1 = inf 6/29: HbI-Lucina HbII-Lucina | HbA-blood_clam beetle cyto-beetle cyto-fish cyto-human drosophila hagfish hemo-alpha-human hemo-alpha-shark hemo-beta-human hemo-beta-shark hemo-polychaete-4 hemo-tunicate-1 hemo-tunicate-3 honeybee lamprey leghemo-pea leghemo-rice midge-8 myo-Dolabella myo-human myo-polychaete myo-shark myo-snail neuro-human neuro-zebrafish PP1-1 = 1.000 (1=199993 0=8) [5 !!] PP1-2 = 1.000 (1=199998 0=3) [3 !!] PP1-3 = 1.000 (1=199997 0=4) [4 !!] PP1-4 = 1.000 (1=199995 0=6) [5 !!] PP1-5 = 1.000 (1=199997 0=4) [3 !!] PP1-6 = 1.000 (1=199997 0=4) [4 !!] PP1-7 = 1.000 (1=199998 0=3) [2 !!!] PP1-8 = 1.000 (1=199996 0=5) [5 !!] PP1 = 1.000 (1=1599971 0=37) [31] LOD1-1 = 4.347 LOD1-2 = 4.699 LOD1-3 = 4.602 LOD1-4 = 4.456 LOD1-5 = 4.602 LOD1-6 = 4.602 LOD1-7 = 4.699 LOD1-8 = 4.523 LOD1 = 4.551 ACT = 1.324 Ne = 1208203.334 RNe1 = inf 7/29: hemo-alpha-human hemo-alpha-shark hemo-beta-human hemo-beta-shark | HbA-blood_clam HbI-Lucina HbII-Lucina beetle cyto-beetle cyto-fish cyto-human drosophila hagfish hemo-polychaete-4 hemo-tunicate-1 hemo-tunicate-3 honeybee lamprey leghemo-pea leghemo-rice midge-8 myo-Dolabella myo-human myo-polychaete myo-shark myo-snail neuro-human neuro-zebrafish PP1-1 = 1.000 (1=199994 0=7) [1 !!!] PP1-2 = 1.000 (1=199998 0=3) [1 !!!] PP1-3 = 1.000 (1=199996 0=5) [1 !!!] PP1-4 = 1.000 (1=199994 0=7) [1 !!!] PP1-5 = 1.000 (1=199997 0=4) [1 !!!] PP1-6 = 1.000 (1=200000 0=1) [1 !!!] PP1-7 = 1.000 (1=199996 0=5) [1 !!!] PP1-8 = 1.000 (1=199995 0=6) [1 !!!] PP1 = 1.000 (1=1599970 0=38) [8 !!] LOD1-1 = 4.398 LOD1-2 = 4.699 LOD1-3 = 4.523 LOD1-4 = 4.398 LOD1-5 = 4.602 LOD1-6 = 5.000 LOD1-7 = 4.523 LOD1-8 = 4.456 LOD1 = 4.541 ACT = 5.421 Ne = 295152.962 RNe1 = inf 8/29: neuro-human neuro-zebrafish | HbA-blood_clam HbI-Lucina HbII-Lucina beetle cyto-beetle cyto-fish cyto-human drosophila hagfish hemo-alpha-human hemo-alpha-shark hemo-beta-human hemo-beta-shark hemo-polychaete-4 hemo-tunicate-1 hemo-tunicate-3 honeybee lamprey leghemo-pea leghemo-rice midge-8 myo-Dolabella myo-human myo-polychaete myo-shark myo-snail PP1-1 = 1.000 (1=199995 0=6) [1 !!!] PP1-2 = 1.000 (1=199996 0=5) [1 !!!] PP1-3 = 1.000 (1=199998 0=3) [1 !!!] PP1-4 = 1.000 (1=199993 0=8) [1 !!!] PP1-5 = 1.000 (1=199999 0=2) [1 !!!] PP1-6 = 1.000 (1=199999 0=2) [1 !!!] PP1-7 = 1.000 (1=199986 0=15) [1 !!!] PP1-8 = 1.000 (1=199999 0=2) [1 !!!] PP1 = 1.000 (1=1599965 0=43) [8 !!] LOD1-1 = 4.456 LOD1-2 = 4.523 LOD1-3 = 4.699 LOD1-4 = 4.347 LOD1-5 = 4.824 LOD1-6 = 4.824 LOD1-7 = 4.097 LOD1-8 = 4.824 LOD1 = 4.497 ACT = 8.581 Ne = 186459.404 RNe1 = inf 9/29: leghemo-pea leghemo-rice | HbA-blood_clam HbI-Lucina HbII-Lucina beetle cyto-beetle cyto-fish cyto-human drosophila hagfish hemo-alpha-human hemo-alpha-shark hemo-beta-human hemo-beta-shark hemo-polychaete-4 hemo-tunicate-1 hemo-tunicate-3 honeybee lamprey midge-8 myo-Dolabella myo-human myo-polychaete myo-shark myo-snail neuro-human neuro-zebrafish PP1-1 = 1.000 (1=199999 0=2) [1 !!!] PP1-2 = 1.000 (1=199999 0=2) [1 !!!] PP1-3 = 1.000 (1=200000 0=1) [1 !!!] PP1-4 = 1.000 (1=199994 0=7) [1 !!!] PP1-5 = 1.000 (1=199988 0=13) [1 !!!] PP1-6 = 1.000 (1=199988 0=13) [1 !!!] PP1-7 = 1.000 (1=199988 0=13) [1 !!!] PP1-8 = 1.000 (1=199986 0=15) [1 !!!] PP1 = 1.000 (1=1599942 0=66) [8 !!] LOD1-1 = 4.824 LOD1-2 = 4.824 LOD1-3 = 5.000 LOD1-4 = 4.398 LOD1-5 = 4.155 LOD1-6 = 4.155 LOD1-7 = 4.155 LOD1-8 = 4.097 LOD1 = 4.335 ACT = 11.939 Ne = 134017.085 RNe1 = inf 10/29: cyto-fish cyto-human hagfish hemo-alpha-human hemo-alpha-shark hemo-beta-human hemo-beta-shark lamprey myo-human myo-shark | HbA-blood_clam HbI-Lucina HbII-Lucina beetle cyto-beetle drosophila hemo-polychaete-4 hemo-tunicate-1 hemo-tunicate-3 honeybee leghemo-pea leghemo-rice midge-8 myo-Dolabella myo-polychaete myo-snail neuro-human neuro-zebrafish PP1-1 = 1.000 (1=199972 0=29) [17 !] PP1-2 = 1.000 (1=199972 0=29) [12 !] PP1-3 = 1.000 (1=199978 0=23) [13 !] PP1-4 = 1.000 (1=199970 0=31) [16 !] PP1-5 = 1.000 (1=199974 0=27) [14 !] PP1-6 = 1.000 (1=199975 0=26) [12 !] PP1-7 = 1.000 (1=199977 0=24) [11 !] PP1-8 = 1.000 (1=199973 0=28) [19 !] PP1 = 1.000 (1=1599791 0=217) [114] LOD1-1 = 3.824 ACT = 4.516 Ne = 44288.651 LOD1-2 = 3.824 ACT = 7.757 Ne = 25783.096 LOD1-3 = 3.921 ACT = 2.999 Ne = 66679.690 LOD1-4 = 3.796 ACT = 4.482 Ne = 44619.701 LOD1-5 = 3.854 ACT = 7.073 Ne = 28277.810 LOD1-6 = 3.870 ACT = 6.383 Ne = 31331.552 LOD1-7 = 3.903 ACT = 7.666 Ne = 26090.596 LOD1-8 = 3.839 ACT = 2.927 Ne = 68331.397 LOD1 = 3.852 ACT = 5.669 Ne = 282225.156 RNe1 = inf 11/29: hemo-beta-human hemo-beta-shark | HbA-blood_clam HbI-Lucina HbII-Lucina beetle cyto-beetle cyto-fish cyto-human drosophila hagfish hemo-alpha-human hemo-alpha-shark hemo-polychaete-4 hemo-tunicate-1 hemo-tunicate-3 honeybee lamprey leghemo-pea leghemo-rice midge-8 myo-Dolabella myo-human myo-polychaete myo-shark myo-snail neuro-human neuro-zebrafish PP1-1 = 1.000 (1=199938 0=63) [42] PP1-2 = 1.000 (1=199915 0=86) [55] PP1-3 = 1.000 (1=199945 0=56) [43] PP1-4 = 1.000 (1=199930 0=71) [42] PP1-5 = 1.000 (1=199950 0=51) [41] PP1-6 = 1.000 (1=199948 0=53) [37] PP1-7 = 1.000 (1=199940 0=61) [43] PP1-8 = 1.000 (1=199938 0=63) [40] PP1 = 1.000 (1=1599504 0=504) [343] LOD1-1 = 3.495 ACT = 2.743 Ne = 72912.405 LOD1-2 = 3.361 ACT = 2.439 Ne = 81996.460 LOD1-3 = 3.545 ACT = 1.535 Ne = 130313.588 LOD1-4 = 3.444 ACT = 3.166 Ne = 63163.376 LOD1-5 = 3.585 ACT = 1.587 Ne = 125992.898 LOD1-6 = 3.569 ACT = 1.867 Ne = 107116.807 LOD1-7 = 3.509 ACT = 2.243 Ne = 89151.514 LOD1-8 = 3.495 ACT = 2.395 Ne = 83512.724 LOD1 = 3.495 ACT = 2.346 Ne = 682050.746 RNe1 = inf 12/29: drosophila midge-8 | HbA-blood_clam HbI-Lucina HbII-Lucina beetle cyto-beetle cyto-fish cyto-human hagfish hemo-alpha-human hemo-alpha-shark hemo-beta-human hemo-beta-shark hemo-polychaete-4 hemo-tunicate-1 hemo-tunicate-3 honeybee lamprey leghemo-pea leghemo-rice myo-Dolabella myo-human myo-polychaete myo-shark myo-snail neuro-human neuro-zebrafish PP1-1 = 0.999 (1=199838 0=163) [118] PP1-2 = 0.999 (1=199855 0=146) [112] PP1-3 = 0.999 (1=199831 0=170) [123] PP1-4 = 0.999 (1=199852 0=149) [99] PP1-5 = 0.999 (1=199829 0=172) [117] PP1-6 = 0.999 (1=199827 0=174) [127] PP1-7 = 0.999 (1=199807 0=194) [98] PP1-8 = 0.999 (1=199766 0=235) [105] PP1 = 0.999 (1=1598605 0=1403) [899] LOD1-1 = 3.086 ACT = 2.639 Ne = 75798.973 LOD1-2 = 3.133 ACT = 2.073 Ne = 96479.575 LOD1-3 = 3.068 ACT = 2.689 Ne = 74369.832 LOD1-4 = 3.125 ACT = 6.420 Ne = 31153.166 LOD1-5 = 3.063 ACT = 2.987 Ne = 66967.079 LOD1-6 = 3.058 ACT = 2.267 Ne = 88232.566 LOD1-7 = 3.011 ACT = 19.400 Ne = 10309.454 LOD1-8 = 2.928 ACT = 43.812 Ne = 4565.014 LOD1 = 3.054 ACT = 12.162 Ne = 131561.591 RNe1 = inf 13/29: beetle cyto-beetle drosophila honeybee midge-8 | HbA-blood_clam HbI-Lucina HbII-Lucina cyto-fish cyto-human hagfish hemo-alpha-human hemo-alpha-shark hemo-beta-human hemo-beta-shark hemo-polychaete-4 hemo-tunicate-1 hemo-tunicate-3 lamprey leghemo-pea leghemo-rice myo-Dolabella myo-human myo-polychaete myo-shark myo-snail neuro-human neuro-zebrafish PP1-1 = 0.996 (1=199214 0=787) [489] PP1-2 = 0.996 (1=199283 0=718) [458] PP1-3 = 0.996 (1=199263 0=738) [452] PP1-4 = 0.996 (1=199230 0=771) [457] PP1-5 = 0.996 (1=199249 0=752) [456] PP1-6 = 0.995 (1=199048 0=953) [570] PP1-7 = 0.996 (1=199229 0=772) [460] PP1-8 = 0.996 (1=199197 0=804) [460] PP1 = 0.996 (1=1593713 0=6295) [3802] LOD1-1 = 2.403 ACT = 4.299 Ne = 46520.163 LOD1-2 = 2.443 ACT = 4.543 Ne = 44025.069 LOD1-3 = 2.431 ACT = 4.316 Ne = 46338.145 LOD1-4 = 2.412 ACT = 4.562 Ne = 43836.158 LOD1-5 = 2.423 ACT = 4.683 Ne = 42707.573 LOD1-6 = 2.319 ACT = 18.028 Ne = 11093.986 LOD1-7 = 2.411 ACT = 7.273 Ne = 27499.804 LOD1-8 = 2.393 ACT = 16.290 Ne = 12277.818 LOD1 = 2.403 ACT = 9.404 Ne = 170138.159 RNe1 = inf 14/29: beetle cyto-beetle honeybee | HbA-blood_clam HbI-Lucina HbII-Lucina cyto-fish cyto-human drosophila hagfish hemo-alpha-human hemo-alpha-shark hemo-beta-human hemo-beta-shark hemo-polychaete-4 hemo-tunicate-1 hemo-tunicate-3 lamprey leghemo-pea leghemo-rice midge-8 myo-Dolabella myo-human myo-polychaete myo-shark myo-snail neuro-human neuro-zebrafish PP1-1 = 0.994 (1=198842 0=1159) [1007] PP1-2 = 0.994 (1=198875 0=1126) [984] PP1-3 = 0.995 (1=198903 0=1098) [943] PP1-4 = 0.994 (1=198815 0=1186) [1020] PP1-5 = 0.994 (1=198859 0=1142) [980] PP1-6 = 0.995 (1=198915 0=1086) [946] PP1-7 = 0.994 (1=198808 0=1193) [981] PP1-8 = 0.994 (1=198896 0=1105) [935] PP1 = 0.994 (1=1590913 0=9095) [7796] LOD1-1 = 2.234 ACT = 1.533 Ne = 130436.049 LOD1-2 = 2.247 ACT = 1.608 Ne = 124349.151 LOD1-3 = 2.258 ACT = 1.529 Ne = 130799.809 LOD1-4 = 2.224 ACT = 1.661 Ne = 120384.467 LOD1-5 = 2.241 ACT = 1.547 Ne = 129253.981 LOD1-6 = 2.262 ACT = 1.517 Ne = 131834.832 LOD1-7 = 2.221 ACT = 3.533 Ne = 56609.070 LOD1-8 = 2.255 ACT = 1.621 Ne = 123402.066 LOD1 = 2.242 ACT = 1.865 Ne = 858106.726 RNe1 = inf 15/29: hemo-alpha-human hemo-alpha-shark | HbA-blood_clam HbI-Lucina HbII-Lucina beetle cyto-beetle cyto-fish cyto-human drosophila hagfish hemo-beta-human hemo-beta-shark hemo-polychaete-4 hemo-tunicate-1 hemo-tunicate-3 honeybee lamprey leghemo-pea leghemo-rice midge-8 myo-Dolabella myo-human myo-polychaete myo-shark myo-snail neuro-human neuro-zebrafish PP1-1 = 0.986 (1=197273 0=2728) [2315] PP1-2 = 0.987 (1=197475 0=2526) [2097] PP1-3 = 0.988 (1=197605 0=2396) [2017] PP1-4 = 0.986 (1=197289 0=2712) [2259] PP1-5 = 0.989 (1=197756 0=2245) [1900] PP1-6 = 0.987 (1=197452 0=2549) [2129] PP1-7 = 0.989 (1=197709 0=2292) [1916] PP1-8 = 0.989 (1=197719 0=2282) [1912] PP1 = 0.988 (1=1580278 0=19730) [16545] LOD1-1 = 1.859 ACT = 14.704 Ne = 13601.920 LOD1-2 = 1.893 ACT = 16.307 Ne = 12264.736 LOD1-3 = 1.916 ACT = 14.020 Ne = 14265.252 LOD1-4 = 1.862 ACT = 13.102 Ne = 15264.474 LOD1-5 = 1.945 ACT = 13.135 Ne = 15226.674 LOD1-6 = 1.889 ACT = 14.383 Ne = 13905.616 LOD1-7 = 1.936 ACT = 10.818 Ne = 18487.691 LOD1-8 = 1.938 ACT = 13.256 Ne = 15087.035 LOD1 = 1.903 ACT = 14.313 Ne = 111783.320 RNe1 = inf 16/29: hemo-polychaete-4 myo-polychaete | HbA-blood_clam HbI-Lucina HbII-Lucina beetle cyto-beetle cyto-fish cyto-human drosophila hagfish hemo-alpha-human hemo-alpha-shark hemo-beta-human hemo-beta-shark hemo-tunicate-1 hemo-tunicate-3 honeybee lamprey leghemo-pea leghemo-rice midge-8 myo-Dolabella myo-human myo-shark myo-snail neuro-human neuro-zebrafish PP1-1 = 0.988 (1=197512 0=2489) [958] PP1-2 = 0.985 (1=197099 0=2902) [978] PP1-3 = 0.988 (1=197521 0=2480) [893] PP1-4 = 0.987 (1=197426 0=2575) [920] PP1-5 = 0.987 (1=197349 0=2652) [902] PP1-6 = 0.988 (1=197661 0=2340) [880] PP1-7 = 0.986 (1=197240 0=2761) [990] PP1-8 = 0.987 (1=197396 0=2605) [932] PP1 = 0.987 (1=1579204 0=20804) [7453] LOD1-1 = 1.899 ACT = 8.205 Ne = 24374.297 LOD1-2 = 1.832 ACT = 10.785 Ne = 18544.803 LOD1-3 = 1.901 ACT = 8.836 Ne = 22634.011 LOD1-4 = 1.884 ACT = 9.384 Ne = 21312.021 LOD1-5 = 1.871 ACT = 10.136 Ne = 19731.095 LOD1-6 = 1.927 ACT = 8.912 Ne = 22440.975 LOD1-7 = 1.854 ACT = 9.928 Ne = 20144.462 LOD1-8 = 1.879 ACT = 11.398 Ne = 17546.960 LOD1 = 1.880 ACT = 9.823 Ne = 162879.879 RNe1 = inf 17/29: myo-Dolabella myo-snail | HbA-blood_clam HbI-Lucina HbII-Lucina beetle cyto-beetle cyto-fish cyto-human drosophila hagfish hemo-alpha-human hemo-alpha-shark hemo-beta-human hemo-beta-shark hemo-polychaete-4 hemo-tunicate-1 hemo-tunicate-3 honeybee lamprey leghemo-pea leghemo-rice midge-8 myo-human myo-polychaete myo-shark neuro-human neuro-zebrafish PP1-1 = 0.867 (1=173415 0=26586) [6136] PP1-2 = 0.860 (1=171938 0=28063) [6082] PP1-3 = 0.862 (1=172461 0=27540) [6096] PP1-4 = 0.856 (1=171282 0=28719) [6250] PP1-5 = 0.863 (1=172543 0=27458) [6173] PP1-6 = 0.872 (1=174464 0=25537) [6000] PP1-7 = 0.863 (1=172610 0=27391) [6089] PP1-8 = 0.863 (1=172650 0=27351) [6087] PP1 = 0.863 (1=1381363 0=218645) [48913] LOD1-1 = 0.814 ACT = 15.928 Ne = 12556.923 LOD1-2 = 0.787 ACT = 16.359 Ne = 12225.874 LOD1-3 = 0.797 ACT = 15.624 Ne = 12801.075 LOD1-4 = 0.776 ACT = 16.471 Ne = 12142.333 LOD1-5 = 0.798 ACT = 14.558 Ne = 13738.664 LOD1-6 = 0.835 ACT = 16.556 Ne = 12080.607 LOD1-7 = 0.799 ACT = 15.982 Ne = 12514.127 LOD1-8 = 0.800 ACT = 15.311 Ne = 13062.499 LOD1 = 0.801 ACT = 16.280 Ne = 98278.083 RNe1 = inf 18/29: hemo-polychaete-4 leghemo-pea leghemo-rice myo-polychaete neuro-human neuro-zebrafish | HbA-blood_clam HbI-Lucina HbII-Lucina beetle cyto-beetle cyto-fish cyto-human drosophila hagfish hemo-alpha-human hemo-alpha-shark hemo-beta-human hemo-beta-shark hemo-tunicate-1 hemo-tunicate-3 honeybee lamprey midge-8 myo-Dolabella myo-human myo-shark myo-snail PP1-1 = 0.852 (1=170405 0=29596) [17173] PP1-2 = 0.853 (1=170544 0=29457) [17019] PP1-3 = 0.856 (1=171103 0=28898) [16820] PP1-4 = 0.856 (1=171233 0=28768) [16765] PP1-5 = 0.856 (1=171220 0=28781) [16461] PP1-6 = 0.850 (1=169942 0=30059) [17088] PP1-7 = 0.855 (1=170988 0=29013) [16968] PP1-8 = 0.855 (1=170997 0=29004) [16856] PP1 = 0.854 (1=1366432 0=233576) [135150] LOD1-1 = 0.760 ACT = 3.853 Ne = 51909.266 LOD1-2 = 0.763 ACT = 4.222 Ne = 47371.258 LOD1-3 = 0.772 ACT = 3.903 Ne = 51240.872 LOD1-4 = 0.775 ACT = 3.897 Ne = 51325.324 LOD1-5 = 0.774 ACT = 4.688 Ne = 42658.359 LOD1-6 = 0.752 ACT = 5.158 Ne = 38772.142 LOD1-7 = 0.770 ACT = 3.712 Ne = 53881.225 LOD1-8 = 0.771 ACT = 4.362 Ne = 45849.074 LOD1 = 0.767 ACT = 4.781 Ne = 334657.672 RNe1 = inf 19/29: hemo-polychaete-4 hemo-tunicate-1 hemo-tunicate-3 leghemo-pea leghemo-rice myo-polychaete neuro-human neuro-zebrafish | HbA-blood_clam HbI-Lucina HbII-Lucina beetle cyto-beetle cyto-fish cyto-human drosophila hagfish hemo-alpha-human hemo-alpha-shark hemo-beta-human hemo-beta-shark honeybee lamprey midge-8 myo-Dolabella myo-human myo-shark myo-snail PP1-1 = 0.638 (1=127623 0=72378) [24741] PP1-2 = 0.647 (1=129334 0=70667) [24019] PP1-3 = 0.638 (1=127690 0=72311) [23935] PP1-4 = 0.638 (1=127541 0=72460) [23747] PP1-5 = 0.639 (1=127853 0=72148) [24425] PP1-6 = 0.641 (1=128120 0=71881) [24273] PP1-7 = 0.645 (1=128987 0=71014) [23836] PP1-8 = 0.645 (1=129045 0=70956) [23663] PP1 = 0.641 (1=1026193 0=573815) [192639] LOD1-1 = 0.246 ACT = 9.116 Ne = 21938.750 LOD1-2 = 0.262 ACT = 8.971 Ne = 22293.224 LOD1-3 = 0.247 ACT = 8.675 Ne = 23055.099 LOD1-4 = 0.246 ACT = 16.667 Ne = 11999.596 LOD1-5 = 0.248 ACT = 6.859 Ne = 29158.678 LOD1-6 = 0.251 ACT = 8.333 Ne = 24001.533 LOD1-7 = 0.259 ACT = 7.608 Ne = 26288.931 LOD1-8 = 0.260 ACT = 13.600 Ne = 14705.684 LOD1 = 0.252 ACT = 11.731 Ne = 136390.000 RNe1 = inf 20/29: beetle cyto-beetle cyto-fish cyto-human drosophila hagfish hemo-alpha-human hemo-alpha-shark hemo-beta-human hemo-beta-shark hemo-polychaete-4 hemo-tunicate-1 hemo-tunicate-3 honeybee lamprey leghemo-pea leghemo-rice midge-8 myo-human myo-polychaete myo-shark neuro-human neuro-zebrafish | HbA-blood_clam HbI-Lucina HbII-Lucina myo-Dolabella myo-snail PP1-1 = 0.580 (1=115950 0=84051) [21722] PP1-2 = 0.563 (1=112616 0=87385) [22656] PP1-3 = 0.583 (1=116677 0=83324) [23064] PP1-4 = 0.580 (1=115980 0=84021) [23029] PP1-5 = 0.561 (1=112251 0=87750) [22808] PP1-6 = 0.570 (1=113921 0=86080) [21861] PP1-7 = 0.586 (1=117298 0=82703) [23098] PP1-8 = 0.586 (1=117274 0=82727) [23473] PP1 = 0.576 (1=921967 0=678041) [181711] LOD1-1 = 0.140 ACT = 442.851 Ne = 451.621 LOD1-2 = 0.110 ACT = 182.282 Ne = 1097.207 LOD1-3 = 0.146 ACT = 53.570 Ne = 3733.449 LOD1-4 = 0.140 ACT = 25.262 Ne = 7917.162 LOD1-5 = 0.107 ACT = 129.227 Ne = 1547.668 LOD1-6 = 0.122 ACT = 360.168 Ne = 555.300 LOD1-7 = 0.152 ACT = 20.095 Ne = 9952.706 LOD1-8 = 0.152 ACT = 17.693 Ne = 11303.791 LOD1 = 0.133 ACT = 157.082 Ne = 10185.790 RNe1 = inf 21/29: HbI-Lucina HbII-Lucina myo-Dolabella myo-snail | HbA-blood_clam beetle cyto-beetle cyto-fish cyto-human drosophila hagfish hemo-alpha-human hemo-alpha-shark hemo-beta-human hemo-beta-shark hemo-polychaete-4 hemo-tunicate-1 hemo-tunicate-3 honeybee lamprey leghemo-pea leghemo-rice midge-8 myo-human myo-polychaete myo-shark neuro-human neuro-zebrafish PP1-1 = 0.503 (1=100699 0=99302) [36851] PP1-2 = 0.509 (1=101892 0=98109) [36685] PP1-3 = 0.496 (1=99276 0=100725) [37514] PP1-4 = 0.494 (1=98777 0=101224) [37301] PP1-5 = 0.509 (1=101822 0=98179) [36628] PP1-6 = 0.509 (1=101738 0=98263) [36378] PP1-7 = 0.496 (1=99163 0=100838) [37677] PP1-8 = 0.495 (1=98951 0=101050) [37452] PP1 = 0.501 (1=802318 0=797690) [296486] LOD1-1 = 0.006 ACT = 101.600 Ne = 1968.513 LOD1-2 = 0.016 ACT = 52.230 Ne = 3829.266 LOD1-3 = -0.006 ACT = 5.745 Ne = 34813.243 LOD1-4 = -0.011 ACT = 4.031 Ne = 49621.769 LOD1-5 = 0.016 ACT = 42.829 Ne = 4669.764 LOD1-6 = 0.015 ACT = 126.689 Ne = 1578.674 LOD1-7 = -0.007 ACT = 4.255 Ne = 47008.903 LOD1-8 = -0.009 ACT = 3.727 Ne = 53663.551 LOD1 = 0.003 ACT = 49.509 Ne = 32317.369 RNe1 = inf 22/29: cyto-fish cyto-human hagfish hemo-alpha-human hemo-alpha-shark hemo-beta-human hemo-beta-shark lamprey | HbA-blood_clam HbI-Lucina HbII-Lucina beetle cyto-beetle drosophila hemo-polychaete-4 hemo-tunicate-1 hemo-tunicate-3 honeybee leghemo-pea leghemo-rice midge-8 myo-Dolabella myo-human myo-polychaete myo-shark myo-snail neuro-human neuro-zebrafish PP1-1 = 0.441 (1=88262 0=111739) [18712] PP1-2 = 0.464 (1=92733 0=107268) [18230] PP1-3 = 0.466 (1=93258 0=106743) [19561] PP1-4 = 0.479 (1=95798 0=104203) [19426] PP1-5 = 0.443 (1=88619 0=111382) [18865] PP1-6 = 0.459 (1=91757 0=108244) [18761] PP1-7 = 0.475 (1=94955 0=105046) [19585] PP1-8 = 0.481 (1=96203 0=103798) [19058] PP1 = 0.463 (1=741585 0=858423) [152198] LOD1-1 = -0.102 ACT = 208.817 Ne = 957.780 LOD1-2 = -0.063 ACT = 110.592 Ne = 1808.454 LOD1-3 = -0.059 ACT = 43.362 Ne = 4612.358 LOD1-4 = -0.037 ACT = 39.074 Ne = 5118.551 LOD1-5 = -0.099 ACT = 100.243 Ne = 1995.153 LOD1-6 = -0.072 ACT = 267.523 Ne = 747.603 LOD1-7 = -0.044 ACT = 42.324 Ne = 4725.430 LOD1-8 = -0.033 ACT = 42.985 Ne = 4652.849 LOD1 = -0.064 ACT = 113.250 Ne = 14128.161 RNe1 = inf 23/29: cyto-fish cyto-human hagfish lamprey | HbA-blood_clam HbI-Lucina HbII-Lucina beetle cyto-beetle drosophila hemo-alpha-human hemo-alpha-shark hemo-beta-human hemo-beta-shark hemo-polychaete-4 hemo-tunicate-1 hemo-tunicate-3 honeybee leghemo-pea leghemo-rice midge-8 myo-Dolabella myo-human myo-polychaete myo-shark myo-snail neuro-human neuro-zebrafish PP1-1 = 0.426 (1=85118 0=114883) [35400] PP1-2 = 0.427 (1=85301 0=114700) [35440] PP1-3 = 0.426 (1=85241 0=114760) [35211] PP1-4 = 0.430 (1=85956 0=114045) [35220] PP1-5 = 0.422 (1=84429 0=115572) [35302] PP1-6 = 0.426 (1=85193 0=114808) [35575] PP1-7 = 0.424 (1=84789 0=115212) [35651] PP1-8 = 0.426 (1=85234 0=114767) [35746] PP1 = 0.426 (1=681261 0=918747) [283545] LOD1-1 = -0.130 ACT = 7.832 Ne = 25537.969 LOD1-2 = -0.129 ACT = 7.525 Ne = 26579.795 LOD1-3 = -0.129 ACT = 6.713 Ne = 29794.741 LOD1-4 = -0.123 ACT = 7.552 Ne = 26484.178 LOD1-5 = -0.136 ACT = 5.910 Ne = 33840.626 LOD1-6 = -0.130 ACT = 6.079 Ne = 32899.565 LOD1-7 = -0.133 ACT = 6.082 Ne = 32881.452 LOD1-8 = -0.129 ACT = 5.462 Ne = 36619.854 LOD1 = -0.130 ACT = 6.932 Ne = 230810.795 RNe1 = inf 24/29: hemo-alpha-human hemo-alpha-shark hemo-beta-human hemo-beta-shark myo-human myo-shark | HbA-blood_clam HbI-Lucina HbII-Lucina beetle cyto-beetle cyto-fish cyto-human drosophila hagfish hemo-polychaete-4 hemo-tunicate-1 hemo-tunicate-3 honeybee lamprey leghemo-pea leghemo-rice midge-8 myo-Dolabella myo-polychaete myo-snail neuro-human neuro-zebrafish PP1-1 = 0.413 (1=82659 0=117342) [14556] PP1-2 = 0.397 (1=79464 0=120537) [14011] PP1-3 = 0.384 (1=76835 0=123166) [14936] PP1-4 = 0.375 (1=75095 0=124906) [14909] PP1-5 = 0.412 (1=82412 0=117589) [14582] PP1-6 = 0.398 (1=79591 0=120410) [14347] PP1-7 = 0.374 (1=74813 0=125188) [14916] PP1-8 = 0.376 (1=75153 0=124848) [14559] PP1 = 0.391 (1=626022 0=973986) [116816] LOD1-1 = -0.152 ACT = 300.735 Ne = 665.041 LOD1-2 = -0.181 ACT = 191.202 Ne = 1046.019 LOD1-3 = -0.205 ACT = 37.771 Ne = 5295.051 LOD1-4 = -0.221 ACT = 27.268 Ne = 7334.694 LOD1-5 = -0.154 ACT = 172.093 Ne = 1162.168 LOD1-6 = -0.180 ACT = 429.342 Ne = 465.831 LOD1-7 = -0.224 ACT = 31.422 Ne = 6365.084 LOD1-8 = -0.220 ACT = 26.398 Ne = 7576.251 LOD1 = -0.192 ACT = 160.662 Ne = 9958.824 RNe1 = inf 25/29: cyto-fish cyto-human hagfish hemo-alpha-human hemo-alpha-shark hemo-beta-human hemo-beta-shark hemo-polychaete-4 hemo-tunicate-1 hemo-tunicate-3 lamprey leghemo-pea leghemo-rice myo-human myo-polychaete myo-shark neuro-human neuro-zebrafish | HbA-blood_clam HbI-Lucina HbII-Lucina beetle cyto-beetle drosophila honeybee midge-8 myo-Dolabella myo-snail PP1-1 = 0.335 (1=66955 0=133046) [31273] PP1-2 = 0.351 (1=70222 0=129779) [32685] PP1-3 = 0.354 (1=70784 0=129217) [33172] PP1-4 = 0.357 (1=71416 0=128585) [33565] PP1-5 = 0.349 (1=69834 0=130167) [33006] PP1-6 = 0.340 (1=67966 0=132035) [31655] PP1-7 = 0.363 (1=72595 0=127406) [33891] PP1-8 = 0.364 (1=72816 0=127185) [33794] PP1 = 0.352 (1=562588 0=1037420) [263041] LOD1-1 = -0.298 ACT = 224.167 Ne = 892.198 LOD1-2 = -0.267 ACT = 73.760 Ne = 2711.508 LOD1-3 = -0.261 ACT = 37.621 Ne = 5316.175 LOD1-4 = -0.255 ACT = 16.002 Ne = 12498.398 LOD1-5 = -0.270 ACT = 54.490 Ne = 3670.392 LOD1-6 = -0.288 ACT = 291.553 Ne = 685.986 LOD1-7 = -0.244 ACT = 11.452 Ne = 17464.813 LOD1-8 = -0.242 ACT = 18.707 Ne = 10691.388 LOD1 = -0.266 ACT = 89.186 Ne = 17940.030 RNe1 = inf 26/29: leghemo-pea leghemo-rice neuro-human neuro-zebrafish | HbA-blood_clam HbI-Lucina HbII-Lucina beetle cyto-beetle cyto-fish cyto-human drosophila hagfish hemo-alpha-human hemo-alpha-shark hemo-beta-human hemo-beta-shark hemo-polychaete-4 hemo-tunicate-1 hemo-tunicate-3 honeybee lamprey midge-8 myo-Dolabella myo-human myo-polychaete myo-shark myo-snail PP1-1 = 0.342 (1=68370 0=131631) [41167] PP1-2 = 0.342 (1=68440 0=131561) [41202] PP1-3 = 0.345 (1=68945 0=131056) [41148] PP1-4 = 0.345 (1=69072 0=130929) [41282] PP1-5 = 0.344 (1=68800 0=131201) [41383] PP1-6 = 0.345 (1=69074 0=130927) [41290] PP1-7 = 0.346 (1=69213 0=130788) [41297] PP1-8 = 0.344 (1=68766 0=131235) [41389] PP1 = 0.344 (1=550680 0=1049328) [330158] LOD1-1 = -0.284 ACT = 1.815 Ne = 110180.421 LOD1-2 = -0.284 ACT = 1.869 Ne = 106997.146 LOD1-3 = -0.279 ACT = 1.990 Ne = 100503.401 LOD1-4 = -0.278 ACT = 1.820 Ne = 109915.135 LOD1-5 = -0.280 ACT = 1.972 Ne = 101424.213 LOD1-6 = -0.278 ACT = 1.741 Ne = 114859.274 LOD1-7 = -0.276 ACT = 1.963 Ne = 101863.608 LOD1-8 = -0.281 ACT = 2.049 Ne = 97605.421 LOD1 = -0.280 ACT = 1.962 Ne = 815673.205 RNe1 = inf 27/29: hemo-polychaete-4 myo-polychaete neuro-human neuro-zebrafish | HbA-blood_clam HbI-Lucina HbII-Lucina beetle cyto-beetle cyto-fish cyto-human drosophila hagfish hemo-alpha-human hemo-alpha-shark hemo-beta-human hemo-beta-shark hemo-tunicate-1 hemo-tunicate-3 honeybee lamprey leghemo-pea leghemo-rice midge-8 myo-Dolabella myo-human myo-shark myo-snail PP1-1 = 0.325 (1=65027 0=134974) [40803] PP1-2 = 0.322 (1=64315 0=135686) [40888] PP1-3 = 0.324 (1=64778 0=135223) [40645] PP1-4 = 0.320 (1=63903 0=136098) [40892] PP1-5 = 0.321 (1=64247 0=135754) [40723] PP1-6 = 0.323 (1=64568 0=135433) [40854] PP1-7 = 0.323 (1=64555 0=135446) [40679] PP1-8 = 0.324 (1=64819 0=135182) [40937] PP1 = 0.323 (1=516212 0=1083796) [326421] LOD1-1 = -0.317 ACT = 3.357 Ne = 59575.585 LOD1-2 = -0.324 ACT = 3.187 Ne = 62757.655 LOD1-3 = -0.320 ACT = 3.252 Ne = 61497.618 LOD1-4 = -0.328 ACT = 2.524 Ne = 79230.187 LOD1-5 = -0.325 ACT = 2.993 Ne = 66818.273 LOD1-6 = -0.322 ACT = 3.118 Ne = 64150.692 LOD1-7 = -0.322 ACT = 3.297 Ne = 60665.009 LOD1-8 = -0.319 ACT = 3.360 Ne = 59516.183 LOD1 = -0.322 ACT = 3.233 Ne = 494871.681 RNe1 = inf 28/29: beetle cyto-beetle cyto-fish cyto-human drosophila hagfish hemo-alpha-human hemo-alpha-shark hemo-beta-human hemo-beta-shark hemo-polychaete-4 hemo-tunicate-1 hemo-tunicate-3 honeybee lamprey leghemo-pea leghemo-rice midge-8 myo-Dolabella myo-human myo-polychaete myo-shark myo-snail neuro-human neuro-zebrafish | HbA-blood_clam HbI-Lucina HbII-Lucina PP1-1 = 0.301 (1=60134 0=139867) [28910] PP1-2 = 0.291 (1=58274 0=141727) [28409] PP1-3 = 0.303 (1=60641 0=139360) [29639] PP1-4 = 0.299 (1=59832 0=140169) [29136] PP1-5 = 0.293 (1=58584 0=141417) [28498] PP1-6 = 0.296 (1=59112 0=140889) [28771] PP1-7 = 0.304 (1=60878 0=139123) [29628] PP1-8 = 0.307 (1=61301 0=138700) [29727] PP1 = 0.299 (1=478756 0=1121252) [232718] LOD1-1 = -0.367 ACT = 99.508 Ne = 2009.897 LOD1-2 = -0.386 ACT = 45.739 Ne = 4372.652 LOD1-3 = -0.361 ACT = 9.799 Ne = 20410.665 LOD1-4 = -0.370 ACT = 7.894 Ne = 25334.235 LOD1-5 = -0.383 ACT = 40.509 Ne = 4937.157 LOD1-6 = -0.377 ACT = 105.292 Ne = 1899.497 LOD1-7 = -0.359 ACT = 5.536 Ne = 36124.815 LOD1-8 = -0.355 ACT = 4.669 Ne = 42834.013 LOD1 = -0.370 ACT = 43.668 Ne = 36639.880 RNe1 = inf 29/29: hemo-polychaete-4 leghemo-pea leghemo-rice myo-polychaete | HbA-blood_clam HbI-Lucina HbII-Lucina beetle cyto-beetle cyto-fish cyto-human drosophila hagfish hemo-alpha-human hemo-alpha-shark hemo-beta-human hemo-beta-shark hemo-tunicate-1 hemo-tunicate-3 honeybee lamprey midge-8 myo-Dolabella myo-human myo-shark myo-snail neuro-human neuro-zebrafish PP1-1 = 0.265 (1=52992 0=147009) [37643] PP1-2 = 0.266 (1=53141 0=146860) [37780] PP1-3 = 0.265 (1=52982 0=147019) [37670] PP1-4 = 0.266 (1=53290 0=146711) [37690] PP1-5 = 0.266 (1=53125 0=146876) [37579] PP1-6 = 0.263 (1=52676 0=147325) [37419] PP1-7 = 0.262 (1=52477 0=147524) [37414] PP1-8 = 0.263 (1=52676 0=147325) [37518] PP1 = 0.265 (1=423359 0=1176649) [300713] LOD1-1 = -0.443 ACT = 1.467 Ne = 136318.675 LOD1-2 = -0.441 ACT = 1.361 Ne = 146970.222 LOD1-3 = -0.443 ACT = 1.429 Ne = 140006.252 LOD1-4 = -0.440 ACT = 1.344 Ne = 148817.467 LOD1-5 = -0.442 ACT = 1.484 Ne = 134813.045 LOD1-6 = -0.447 ACT = 1.437 Ne = 139133.588 LOD1-7 = -0.449 ACT = 1.443 Ne = 138632.961 LOD1-8 = -0.447 ACT = 1.577 Ne = 126795.237 LOD1 = -0.444 ACT = 1.534 Ne = 1043296.656 RNe1 = inf ASDSF[min=0.100] = 0.004 MSDSF = 0.016 min Ne = 9958.824 (partition = 24)