BAli---Phy

Download

Please see the detailed installation instructions.

Beta (development) release

• 4.0-beta15 (NEWS):
  • Linux:   [Ubuntu 20.04]   [Ubuntu 22.04]   [Ubuntu 24.04]   [Singularity Image]
  • Mac:   [Intel]   [Apple Silicon]
  • Windows:   [Windows]

Current (stable) release

• 3.6.1 (Changes):   [Linux 64-bit]   [Mac 64-bit (Mavericks)]   [Windows 64-bit]   [git]

You can now install using a package manager on some systems:

• Mac and Linux: Homebrew users can install with brew.

  % brew update
  % brew tap brewsci/bio
  % brew install bali-phy

  (Yes, you can use homebrew on linux)
• Mac and Linux: After installing conda and bioconda, to install bali-phy do:

  % conda install bali-phy

  Mac users will need OS X 10.13 or higher.

Older releases

• 2.3 (Changes)
• 2.2 (Changes)
• 2.1 (Changes)
• 2.0 (Changes)
• <2 (Changes)