BAli---Phy

Example analyses with results

1. 5S rRNA - 25 sequences
   % bali-phy 25.fasta --smodel gtr+Rates.gamma[4]+inv
2. 5S rRNA - 48 sequences
   % bali-phy 48-fsa.fasta --smodel gtr+Rates.gamma[4]+inv
3. Globins - 28 sequences
   % bali-phy few-globins.fasta --smodel lg08+Rates.free[n=5]
4. ITS1 + 5.8S + ITS2 - 68 sequences
   % bali-phy -c ITS.txt --name ITS-3.1.5