x2_sym — Exchangability matrix on doublets constructed
from nucleotide exchange rates
Usage
x2_sym(submodel: ExchangeModel<b>, a: a)
→ ExchangeModel<a>
Arguments
-
submodel: -
The singlet exchange model
-
a: -
The Doublets alphabet
-
Default: The alphabet in the current context
Original default expressions
-
a -
get_state(alphabet)
Description
Exchangability matrix on doublets constructed from an exchangability matrix on nucleotides.
Thus function can be used to build up doublet models incrementally.
Examples
HKY85_sym +> x2_sym +> F
GTR_sym +> x2_sym +> F
x2_sym(HKY85_sym)