x2x2 — Rate matrix constructed from rate matrices on each doublet position

Usage

x2x2(rates1: CTMC<b>, rates2: CTMC<b>, a: a) → CTMC<a>

Type constraints: Doublets<a,b>

Arguments

rates1:

Rates for position 1

rates2:

Rates for position 2

a:

The Triplets alphabet

Default: The alphabet in the current context

Original default expressions
a 
get_state(alphabet)

Description

A doublet rate matrix constructed from separate nucleotide rate matrices for the first and second doublet positions

Examples

q=HKY85(a=getNucleotides); x2x2(q,q)

See also

x2